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<art>
   <ui>1743-8977-5-6</ui>
   <ji>1743-8977</ji>
   <fm>
      <dochead>Research</dochead>
      <bibl>
         <title>
            <p>DNA damage and cytotoxicity in type II lung epithelial (A549) cell cultures after exposure to diesel exhaust and urban street particles</p>
         </title>
         <aug>
            <au id="A1">
               <snm>Danielsen</snm>
               <mnm>H&#248;gh</mnm>
               <fnm>Pernille</fnm>
               <insr iid="I1"/>
               <email>peda@pubhealth.ku.dk</email>
            </au>
            <au id="A2">
               <snm>Loft</snm>
               <fnm>Steffen</fnm>
               <insr iid="I1"/>
               <email>stlo@pubhealth.ku.dk</email>
            </au>
            <au id="A3" ca="yes">
               <snm>M&#248;ller</snm>
               <fnm>Peter</fnm>
               <insr iid="I1"/>
               <email>p.moller@pubhealth.ku.dk</email>
            </au>
         </aug>
         <insg>
            <ins id="I1">
               <p>Institute of Public Health, Department of Environmental Health, University of Copenhagen, &#216;ster Farimagsgade 5, DK-1014 Copenhagen K, Denmark</p>
            </ins>
         </insg>
         <source>Particle and Fibre Toxicology</source>
         <issn>1743-8977</issn>
         <pubdate>2008</pubdate>
         <volume>5</volume>
         <issue>1</issue>
         <fpage>6</fpage>
         <url>http://www.particleandfibretoxicology.com/content/5/1/6</url>
         <xrefbib>
            <pubidlist>
               <pubid idtype="pmpid">18397523</pubid>
               <pubid idtype="doi">10.1186/1743-8977-5-6</pubid>
            </pubidlist>
         </xrefbib>
      </bibl>
      <history>
         <rec>
            <date>
               <day>25</day>
               <month>9</month>
               <year>2007</year>
            </date>
         </rec>
         <acc>
            <date>
               <day>08</day>
               <month>4</month>
               <year>2008</year>
            </date>
         </acc>
         <pub>
            <date>
               <day>08</day>
               <month>4</month>
               <year>2008</year>
            </date>
         </pub>
      </history>
      <cpyrt>
         <year>2008</year>
         <collab>Danielsen et al; licensee BioMed Central Ltd.</collab>
         <note>This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<url>http://creativecommons.org/licenses/by/2.0</url>), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</note>
      </cpyrt>
      <abs>
         <sec>
            <st>
               <p>Abstract</p>
            </st>
            <sec>
               <st>
                  <p>Background</p>
               </st>
               <p>Exposure to air pollution particles has been acknowledged to be associated with excess generation of oxidative damage to DNA in experimental model systems and humans. The use of standard reference material (SRM), such as SRM1650 and SRM2975, is advantageous because experiments can be reproduced independently, but exposure to such samples may not mimic the effects observed after exposure to authentic air pollution particles. This study was designed to compare the DNA oxidizing effects of authentic street particles with SRM1650 and SRM2975. The authentic street particles were collected at a traffic intensive road in Copenhagen, Denmark.</p>
            </sec>
            <sec>
               <st>
                  <p>Results</p>
               </st>
               <p>All of the particles generated strand breaks and oxidized purines in A549 lung epithelial cells in a dose-dependent manner and there were no overt differences in their potency. The exposures also yielded dose-dependent increase of cytotoxicity (as lactate dehydrogenase release) and reduced colony forming ability with slightly stronger cytotoxicity of SRM1650 than of the other particles. In contrast, only the authentic street particles were able to generate 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-oxodG) in calf thymus DNA, which might be due to the much higher level of transition metals.</p>
            </sec>
            <sec>
               <st>
                  <p>Conclusion</p>
               </st>
               <p>Authentic street particles and SRMs differ in their ability to oxidize DNA in a cell-free environment, whereas cell culture experiments indicate that the particle preparations elicit a similar alteration of the level of DNA damage and small differences in cytotoxicity. Although it cannot be ruled out that SRMs and authentic street particles might elicit different effects in animal experimental models, this study indicates that on the cellular level, SRM1650 and SRM2975 are suitable surrogate samples for the study of authentic street particles.</p>
            </sec>
         </sec>
      </abs>
   </fm>
   <bdy>
      <sec>
         <st>
            <p>Background</p>
         </st>
         <p>The hazardous effects related to genotoxicity and cytotoxicity of particulate matter (PM) has been investigated in various cell culture experiments. Oxidative stress due to transition metals and particle-induced inflammation are believed to be important determinants for the generation of DNA damage such as strand breaks (SB) and oxidative damage to the DNA <abbrgrp><abbr bid="B1">1</abbr></abbrgrp>. The 8-oxoguanine base lesion is generated in DNA during oxidative stress, and the 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-oxodG) nucleotide is premutagenic if not repaired prior to DNA replication <abbrgrp><abbr bid="B2">2</abbr></abbrgrp>. The level of oxidized guanine lesions can be measured by chromatographic techniques, antibody-based methods, and enzymatically recognized by e.g. the formamidopyrimidine DNA glycosylase (FPG) of <it>E. coli </it><abbrgrp><abbr bid="B3">3</abbr><abbr bid="B4">4</abbr></abbrgrp>. There is evidence that exposure to urban air pollution increases the level of FPG sites in human mononuclear blood cells, whereas the level of SB is affected to a lesser degree <abbrgrp><abbr bid="B5">5</abbr><abbr bid="B6">6</abbr><abbr bid="B7">7</abbr></abbrgrp>.</p>
         <p>The particulate fraction of air pollution in busy streets originates from traffic exhaust and especially from diesel powered vehicles as well as wear on breaks, tires and road material <abbrgrp><abbr bid="B8">8</abbr></abbrgrp>. Humans are exposed to a mixture of air pollution particles, but in particular the diesel exhaust particles (DEP) have been extensively studied because of their chemical composition, small size, and large surface area. Samples of PM collected from urban air have different compositions and particle sizes, because of differences in location of sampling and collection time of the year. This makes it difficult to compare the detrimental effects of various samples of authentic particles. Moreover standard particle preparations might not mimic authentic air pollution particles. We have previously used the commercially available Standard Reference Materials (SRM) from the National Institute of Standards and Technology (NIST) to study effects of oxidative stress elicited by DEP in animal experiments and cell cultures <abbrgrp><abbr bid="B9">9</abbr><abbr bid="B10">10</abbr><abbr bid="B11">11</abbr><abbr bid="B12">12</abbr><abbr bid="B13">13</abbr><abbr bid="B14">14</abbr><abbr bid="B15">15</abbr><abbr bid="B16">16</abbr><abbr bid="B17">17</abbr><abbr bid="B18">18</abbr></abbrgrp>. The SRM1650 and SRM2975 preparations are samples of DEP that are well characterized for specific physical and chemical properties, such as concentrations of polycyclic aromatic hydrocarbons (PAH). Results from animal experimental models indicate that SRM1650 oxidizes DNA in the lung following pulmonary exposure <abbrgrp><abbr bid="B11">11</abbr><abbr bid="B12">12</abbr><abbr bid="B14">14</abbr></abbrgrp>. In addition, oral administration of both SRM1650 and SRM2975 increased the level of oxidized DNA in the liver, lung and colon of rats <abbrgrp><abbr bid="B13">13</abbr><abbr bid="B16">16</abbr><abbr bid="B18">18</abbr><abbr bid="B19">19</abbr></abbrgrp>. However, it is important to note that the SRM1650 preparation has a higher content of PAH and iron ions compared to SRM2975 <abbrgrp><abbr bid="B20">20</abbr><abbr bid="B21">21</abbr><abbr bid="B22">22</abbr></abbrgrp>. There is some indication from in vitro studies that SRM1650 generate more lipid-peroxidation than SRM2975 <abbrgrp><abbr bid="B22">22</abbr></abbrgrp> and the inflammation potential may also differ between the SRMs <abbrgrp><abbr bid="B10">10</abbr></abbrgrp>. This suggests that various types of model particles might display different responses in the same experimental setup, although the oral administration studies did not show differences in the DNA oxidizing potential between SRM1650 and SRM2975 <abbrgrp><abbr bid="B16">16</abbr><abbr bid="B18">18</abbr><abbr bid="B19">19</abbr></abbrgrp>.</p>
         <p>The aim of this study was to investigate whether SRM1650 and SRM2975, which are commercially available DEP preparations, and authentic PM collected in a busy street (ASPM; authentic street particulate matter) have different oxidizing potential of DNA in a non-cellular environment and in cell cultures. To this end we investigated the induction of DNA damage in naked calf thymus DNA and A549 cells. The A549 cells originate from lung epithelial type II cells. These cells are thought to be progenitor cells for damaged type I epithelial cells in the alveoli. They are involved in the alveolar epithelial proliferative response observed by long-term inhalation of high doses of DEP and carbon black <abbrgrp><abbr bid="B23">23</abbr><abbr bid="B24">24</abbr></abbrgrp>. The cytotoxic effect of PM exposure was investigated as cell release of lactate dehydrogenase (LDH) and the ability to form colonies.</p>
      </sec>
      <sec>
         <st>
            <p>Results</p>
         </st>
         <sec>
            <st>
               <p>Characterization of particles</p>
            </st>
            <p>Iron and copper were the most abundant transition metals of ASPM samples. The concentration of iron and copper in the ASPM samples were 37.4 &#177; 2.4 &#956;g/mg and 2.1 &#177; .016 &#956;g/mg, respectively (mean &#177; SD, n = 5). In comparison, there is much lower content of iron and copper in the SRM1650 (0.0031 and 0.020 &#956;g/mg, respectively) and SRM2975 (0.0009 &#956;g/mg and below limit of detection, respectively) <abbrgrp><abbr bid="B22">22</abbr></abbrgrp>. It has not been possible to make a thorough assessment of the total concentration of PAH in the ASPM samples because of limited material. However, a recent collection of similar samples at the same location found that the concentration of 8 different PAH was 40 ng/mg <abbrgrp><abbr bid="B25">25</abbr></abbrgrp>. The concentration of same PAH in the SRM1650 and SRM2975 preparations has been reported to be 47 and 29 ng/mg, respectively <abbrgrp><abbr bid="B20">20</abbr><abbr bid="B21">21</abbr></abbrgrp>. Collectively, the most pronounced difference between the SRMs and ASPM is the high concentration of transition metals in the latter.</p>
         </sec>
         <sec>
            <st>
               <p>Cytotoxicity</p>
            </st>
            <p>The data on the cytotoxicity of PM, determined as release of LDH, are depicted in figure <figr fid="F1">1</figr>. The figure shows a dose-dependent increase in LDH enzyme activity in the cell culture supernatant at 25, 100 and 250 &#956;g/ml for SRM1650 and at 100 and 250 &#956;g/ml for SRM2975 (<it>p </it>&lt; 0.05, ANOVA). The SRM1650 preparation was more cytotoxic to the cells than SRM2975 at 250 &#956;g/ml (<it>p </it>&lt; 0.01, Mann-Whitney U test) and more cytotoxic than both SRM2975 and ASPM at 25 &#956;g/ml (<it>p </it>&lt; 0.05, Kruskal-Wallis test). The ASPM preparation (all filters pooled) showed no significantly increased cytotoxicity at any doses compared to the control. The cytotoxicity at 250 &#956;g/ml for ASPM was not measured. It should be noted that exposure to 100 &#956;g/ml of ASPM was associated with approximately 20% increased LDH release that was not statistically significant at 5% level, but a similar level of LDH release was statistically significant for the SRM2975 samples. This suggests that the ASPM samples could be associated with cytotoxicity to a similar degree as the SRM2975 preparation.</p>
            <fig id="F1">
               <title>
                  <p>Figure 1</p>
               </title>
               <caption>
                  <p>Cytotoxicity of A549 cells exposed to SRM2975 (solid bars), SRM1650 (hatched bars) and ASPM (open bars)</p>
               </caption>
               <text>
                  <p>Cytotoxicity of A549 cells exposed to SRM2975 (solid bars), SRM1650 (hatched bars) and ASPM (open bars). The 100% maximum LDH release is obtained by treatment of cell cultures with Triton X-100, whereas the baseline LDH release in untreated cell cultures is 0%. Bars denote the mean &#177; SEM; (n = 3). * Statistically significant compared to control <it>p </it>&lt; 0.05 (Kruskal-Wallis test). <sup># </sup>Higher level of LDH release of SRM1650 compared to SRM2975 (<it>p </it>&lt; 0.01, Mann-Whitney U test). <sup>&#164; </sup>Higher level of LDH release of SRM1650 compared to SRM2975 and ASPM (<it>p </it>&lt; 0.05, Kruskal-Wallis test).</p>
               </text>
               <graphic file="1743-8977-5-6-1"/>
            </fig>
            <p>Overall, the data from the LDH assay suggest that SRM1650 was more cytotoxic than SRM2975 at equal mass concentration and it cannot be ruled out that the ASPM preparations are slightly less cytotoxic.</p>
         </sec>
         <sec>
            <st>
               <p>Colony forming ability</p>
            </st>
            <p>The results from the colony forming assay depicted in figure <figr fid="F2">2</figr> demonstrated a moderate loss of ability to form colonies. For SRM1650, the loss was significant for doses at 100 and 250 &#956;g/ml (<it>p </it>&lt; 0.05, Kruskal-Wallis test). For SRM2975, the loss was significant for 2.5 and 250 &#956;g/ml (<it>p </it>&lt; 0.05, Kruskal-Wallis test). Considering the non-significant effects of SRM2975 at 25 and 100 &#956;g/ml, the effect observed in cell cultures exposed at the dose of 2.5 &#956;g/ml could be a chance finding. The ASPM preparation (all filters pooled) showed no significant loss of the ability to form colonies.</p>
            <fig id="F2">
               <title>
                  <p>Figure 2</p>
               </title>
               <caption>
                  <p>Colony forming ability expressed as relative to the number of colonies in the control, which are set to 1</p>
               </caption>
               <text>
                  <p>Colony forming ability expressed as relative to the number of colonies in the control, which are set to 1. The dots represents mean &#177; SEM; (n = 3). Decreased colony forming ability of cell cultures exposed to SRM2975 (<sup>#</sup>) SRM1650 (*) compared to the unexposed cultures (p &lt; 0.05, Kruskal-Wallis test).</p>
               </text>
               <graphic file="1743-8977-5-6-2"/>
            </fig>
         </sec>
         <sec>
            <st>
               <p>In vitro generation of 8-oxodG in calf thymus DNA</p>
            </st>
            <p>Figure <figr fid="F3">3</figr> depicts the results of the generation of 8-oxodG in calf thymus DNA by the PM preparations. The SRM1650 and SRM2975, with or without presence of H<sub>2</sub>O<sub>2</sub>, did not generate 8-oxodG in incubations lasting 30 minutes (figure <figr fid="F3">3A</figr> and <figr fid="F3">3B</figr>). Increasing the incubation time to 120 minutes did not show any SRM1650 or SRM2975 mediated oxidation of DNA with or without H<sub>2</sub>O<sub>2 </sub>(data not shown).</p>
            <fig id="F3">
               <title>
                  <p>Figure 3</p>
               </title>
               <caption>
                  <p>8-oxodG formation in calf thymus DNA measured with HPLC/ED after 30 minutes exposure to A) SRM2975 and B) SRM1650 and C) ASPM; &#9632; filter 1, &#9650; filter 2, &#9651; filter 3, &#9675; filter 4, &#9670; filter 5</p>
               </caption>
               <text>
                  <p>8-oxodG formation in calf thymus DNA measured with HPLC/ED after 30 minutes exposure to A) SRM2975 and B) SRM1650 and C) ASPM; &#9632; filter 1, &#9650; filter 2, &#9651; filter 3, &#9675; filter 4, &#9670; filter 5. For SRM2975 and SRM1650 dots represents mean &#177; SEM; n = 3. The DNA was incubated at 37&#176;C with 5 mM H<sub>2</sub>O<sub>2</sub>. For ASPM, the DNA was incubated at 37&#176;C with 10 &#956;M H<sub>2</sub>O<sub>2</sub>.</p>
               </text>
               <graphic file="1743-8977-5-6-3"/>
            </fig>
            <p>In contrast to the SRM preparations, the ASPM generated 8-oxodG in calf thymus DNA in a dose-depended manner and were more potent in the sense that it required much lower concentration of H<sub>2</sub>O<sub>2 </sub>to yield effect (10 &#956;M versus 5 mM H<sub>2</sub>O<sub>2</sub>). Figure <figr fid="F3">3C</figr> shows concentration-dependent increases in the level of 8-oxodG after 30 minutes exposure to the 5 different samples of ASPM. No statistical analysis was made to differentiate the filters because each point represents 1&#8211;2 determinations. The results suggest that the different filters had similar ability to generate 8-oxodG and any minor differences did not appear to be associated with the small variation in iron or copper content.</p>
         </sec>
         <sec>
            <st>
               <p>DNA damage in A549 cells</p>
            </st>
            <p>Figure <figr fid="F4">4</figr> depicts the dose-response and time curves of SB and FPG sites in A549 cells exposed to SRM1650 and SRM2975. There were significantly increased levels of SB and FPG sites after 3, 24 and 48 hours exposure to SRM2975 at doses 25, 100 and 250 &#956;g/ml (<it>p </it>&lt; 0.01, ANOVA). The level of SB was also significantly increased after 48 hours by SRM2975 at dose 2.5 &#956;g/ml (<it>p </it>&lt; 0.05, ANOVA). In cells exposed to SRM1650, the level of SB and FPG sites after 3, 24 and 48 hours were significantly increased at doses 100 and 250 &#956;g/ml (<it>p </it>&lt; 0.01, ANOVA, except SB at 24 hours; <it>p </it>&lt; 0.01, Kruskal-Wallis test). The levels of SB after 48 hours and FPG sites after 24 hours were significantly increased by SRM1650 at dose 25 &#956;g/ml (<it>p </it>&lt; 0.01 and <it>p </it>&lt; 0.05, respectively, ANOVA). The lowest effective SRM1650 dose in the 3 hours exposure experiments was 2.5 &#956;g/ml for both SB and FPG sites (<it>p </it>&lt; 0.05, ANOVA).</p>
            <fig id="F4">
               <title>
                  <p>Figure 4</p>
               </title>
               <caption>
                  <p>DNA damage measured by the comet assay in A549 cells exposed to SRM2975 and SRM1650 for 3, 24 or 48 hours</p>
               </caption>
               <text>
                  <p>DNA damage measured by the comet assay in A549 cells exposed to SRM2975 and SRM1650 for 3, 24 or 48 hours. (A) SB, SRM2975, (B) FPG sites, SRM2975, (C) SB, SRM1650 and (D) FPG sites, SRM1650. Mean &#177; SEM, n = 9. * Dose where all exposure times are statistically significant compared to control (<it>p </it>&lt; 0.01, ANOVA, except for 3 hours exposure to 100 &#956;g/ml where SRM1650 is tested with Kruskal-Wallis test, <it>p </it>&lt; 0.05). <sup># </sup>Dose where a single time point is statistically significant compared to the respective control (ANOVA): (A) SRM2975, SB, 2.5 &#956;g/ml, 48 h, <it>p </it>&lt; 0.05, (C) SRM1650, SB, 2.5 &#956;g/ml, 3 h, <it>p </it>&lt; 0.05 and SRM1650, SB, 25 &#956;g/ml, 48 h, <it>p </it>&lt; 0.01, (D) SRM1650, FPG, 2.5 &#956;g/ml, 3 h, <it>p </it>&lt; 0.05 and SRM1650, FPG, 25 &#956;g/ml, 24 h, <it>p </it>&lt; 0.05.</p>
               </text>
               <graphic file="1743-8977-5-6-4"/>
            </fig>
            <p>Table <tblr tid="T1">1</tblr> shows the level of SB and FPG sites in A549 cells exposed for 24 hours to the ASPM samples. There was a general tendency of dose-dependent elevation of DNA damage, but when tested for each filter this only reached statistical significance for filter number 5 (<it>p </it>&lt; 0.05, Kruskal-Wallis test). The level of DNA damage for all filters reached statistical significance at 100 &#956;g/ml (<it>p </it>&lt; 0.05, randomized block ANOVA). Due to limited amount of ASPM, we excluded the highest dose of 250 &#956;g/ml. The exposure time of 24 hours was chosen because 3 hours exposures of SRMs had a narrow linear dose-response relationship and the cell cultures treated with SRM for 48 hours were nearly confluent.</p>
            <tbl id="T1">
               <title>
                  <p>Table 1</p>
               </title>
               <caption>
                  <p>DNA damage in A549 cells exposed to authentic street particulate matter for 24 hours.</p>
               </caption>
               <tblbdy cols="5">
                  <r>
                     <c ca="left">
                        <p>
                           <b>Filter<sup>a</sup></b>
                        </p>
                     </c>
                     <c cspan="4" ca="center">
                        <p>
                           <b>Dose (&#956;g/ml)</b>
                        </p>
                     </c>
                  </r>
                  <r>
                     <c cspan="5">
                        <hr/>
                     </c>
                  </r>
                  <r>
                     <c>
                        <p/>
                     </c>
                     <c ca="center">
                        <p>
                           <b>Control</b>
                        </p>
                     </c>
                     <c ca="center">
                        <p>
                           <b>2.5</b>
                        </p>
                     </c>
                     <c ca="center">
                        <p>
                           <b>25</b>
                        </p>
                     </c>
                     <c ca="center">
                        <p>
                           <b>100</b>
                        </p>
                     </c>
                  </r>
                  <r>
                     <c>
                        <p/>
                     </c>
                     <c cspan="4">
                        <hr/>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>Filter 1</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>SB</p>
                     </c>
                     <c ca="center">
                        <p>0.143 &#177; 0.0208</p>
                     </c>
                     <c ca="center">
                        <p>0.122 &#177; 0.0185</p>
                     </c>
                     <c ca="center">
                        <p>0.411 &#177; 0.134</p>
                     </c>
                     <c ca="center">
                        <p>0.481 &#177; 0.149</p>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>FPG</p>
                     </c>
                     <c ca="center">
                        <p>0.069 &#177; 0.0452</p>
                     </c>
                     <c ca="center">
                        <p>0.066 &#177; 0.0286</p>
                     </c>
                     <c ca="center">
                        <p>0.205 &#177; 0.0690</p>
                     </c>
                     <c ca="center">
                        <p>0.191 &#177; 0.0488</p>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>Filter 2</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>SB</p>
                     </c>
                     <c ca="center">
                        <p>0.104 &#177; 0.00134</p>
                     </c>
                     <c ca="center">
                        <p>0.090 &#177; 0.00314</p>
                     </c>
                     <c ca="center">
                        <p>0.122 &#177; 0.0207</p>
                     </c>
                     <c ca="center">
                        <p>0.201 &#177; 0.0233</p>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>FPG</p>
                     </c>
                     <c ca="center">
                        <p>0.106 &#177; 0.0196</p>
                     </c>
                     <c ca="center">
                        <p>0.041 &#177; 0.0160</p>
                     </c>
                     <c ca="center">
                        <p>0.101 &#177; 0.0386</p>
                     </c>
                     <c ca="center">
                        <p>0.148 &#177; 0.0338</p>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>Filter 3</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>SB</p>
                     </c>
                     <c ca="center">
                        <p>0.116 &#177; 0.00947</p>
                     </c>
                     <c ca="center">
                        <p>0.097 &#177; 0.0160</p>
                     </c>
                     <c ca="center">
                        <p>0.352 &#177; 0.134</p>
                     </c>
                     <c ca="center">
                        <p>0.308 &#177; 0.0566</p>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>FPG</p>
                     </c>
                     <c ca="center">
                        <p>0.087 &#177; 0.0466</p>
                     </c>
                     <c ca="center">
                        <p>0.104 &#177; 0.0213</p>
                     </c>
                     <c ca="center">
                        <p>0.175 &#177; 0.0376</p>
                     </c>
                     <c ca="center">
                        <p>0.305 &#177; 0.0888</p>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>Filter 4</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>SB</p>
                     </c>
                     <c ca="center">
                        <p>0.104 &#177; 0.0134</p>
                     </c>
                     <c ca="center">
                        <p>0.089 &#177; 0.0153</p>
                     </c>
                     <c ca="center">
                        <p>0.127 &#177; 0.0110</p>
                     </c>
                     <c ca="center">
                        <p>0.453 &#177; 0.178</p>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>FPG</p>
                     </c>
                     <c ca="center">
                        <p>0.106 &#177; 0.0196</p>
                     </c>
                     <c ca="center">
                        <p>0.076 &#177; 0.0253</p>
                     </c>
                     <c ca="center">
                        <p>0.102 &#177; 0.0177</p>
                     </c>
                     <c ca="center">
                        <p>0.210 &#177; 0.0522</p>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>Filter 5</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>SB</p>
                     </c>
                     <c ca="center">
                        <p>0.150 &#177; 0.00919</p>
                     </c>
                     <c ca="center">
                        <p>0.197 &#177; 0.0415</p>
                     </c>
                     <c ca="center">
                        <p>0.218 &#177; 0.0395</p>
                     </c>
                     <c ca="center">
                        <p>0.399 &#177; 0.0309<sup>b</sup></p>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>FPG</p>
                     </c>
                     <c ca="center">
                        <p>0.289 &#177; 0.0266</p>
                     </c>
                     <c ca="center">
                        <p>0.513 &#177; 0.0552</p>
                     </c>
                     <c ca="center">
                        <p>0.415 &#177; 0.0584</p>
                     </c>
                     <c ca="center">
                        <p>0.621 &#177; 0.0276<sup>b</sup></p>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>All filters</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>SB</p>
                     </c>
                     <c ca="center">
                        <p>0.123 &#177; 0.00975</p>
                     </c>
                     <c ca="center">
                        <p>0.119 &#177; 0.0204</p>
                     </c>
                     <c ca="center">
                        <p>0.246 &#177; 0.0586</p>
                     </c>
                     <c ca="center">
                        <p>0.368 &#177; 0.0512<sup>c</sup></p>
                     </c>
                  </r>
                  <r>
                     <c indent="1" ca="left">
                        <p>FPG</p>
                     </c>
                     <c ca="center">
                        <p>0.131 &#177; 0.0400</p>
                     </c>
                     <c ca="center">
                        <p>0.160 &#177; 0.0888</p>
                     </c>
                     <c ca="center">
                        <p>0.200 &#177; 0.0575</p>
                     </c>
                     <c ca="center">
                        <p>0.295 &#177; 0.0853<sup>c</sup></p>
                     </c>
                  </r>
               </tblbdy>
               <tblfn>
                  <p><sup>a </sup>The data from filter 1&#8211;5 represent lesions/10<sup>6 </sup>bp as mean &#177; SEM, n = 6.</p>
                  <p><sup>b </sup>Statistical significant compared to the control, <it>p </it>&lt; 0.05 (Kruskal-Wallis test), N<sub>total </sub>= 24.</p>
                  <p><sup>c </sup>Statistical significant compared to the control, <it>p </it>&lt; 0.05 (randomized block ANOVA), the statistical analysis was based on the mean value of each filter (N<sub>total </sub>= 20).</p>
               </tblfn>
            </tbl>
            <p>Figure <figr fid="F5">5</figr> shows the level SB and FPG sites generated by ASPM (all filters), SRM1650 and SRM2975 after 24 hours exposure. For the purpose of comparing the genotoxicity of ASPM and SRMs, the data from figure <figr fid="F4">4</figr> (250 &#956;g/ml is excluded) and table <tblr tid="T1">1</tblr> were baseline adjusted. Comparisons of the effect at doses 25 and 100 &#956;g/ml did not reveal significant differences in SB and FPG sites between the types of PM preparations (<it>p </it>> 0.05, Kruskal-Wallis test).</p>
            <fig id="F5">
               <title>
                  <p>Figure 5</p>
               </title>
               <caption>
                  <p>Baseline-adjusted SB (A) and FPG sites (B) in A549 cell cultures exposed 24 hours to SRM1650, SRM2975 and ASPM</p>
               </caption>
               <text>
                  <p>Baseline-adjusted SB (A) and FPG sites (B) in A549 cell cultures exposed 24 hours to SRM1650, SRM2975 and ASPM. The data are obtained from figure 4 and table 1. Data points are mean &#177; SEM (SRMs, n = 9; ASPM, n = 6). There was no significant difference between the particle's ability to induce SB and FPG sites at any doses (<it>p </it>> 0.05, Kruskal-Wallis test).</p>
               </text>
               <graphic file="1743-8977-5-6-5"/>
            </fig>
         </sec>
      </sec>
      <sec>
         <st>
            <p>Discussion</p>
         </st>
         <p>In this study we have shown that there are no clear differences in the genotoxicity of ASPM and the SRM1650 and SRM2975 preparations assessed as the dose-response relationship at different periods of incubation in A549 cells. This genotoxicity cannot be predicted from the ability of the PM to induce cytotoxicity, where mainly SRM1650 had effect, or oxidative damage to DNA in a cell-free environment, where only ASPM had effect.</p>
         <p>In the present study, ASPM generated high levels of 8-oxodG in calf thymus DNA, whereas SRM1650 and SRM2975 was not able to oxidize DNA at even high doses of H<sub>2</sub>O<sub>2</sub>. These data are consistent with previous studies on authentic urban particles showing increased 8-oxodG in the presence of H<sub>2</sub>O<sub>2 </sub><abbrgrp><abbr bid="B26">26</abbr><abbr bid="B27">27</abbr></abbrgrp>. However, samples of total suspended street particulates obtained at different locations of Maastricht did not generate 8-oxodG in Salmon testis DNA in a manner that reflected the variation in the local traffic intensity <abbrgrp><abbr bid="B28">28</abbr></abbrgrp>. Since the oxidation of DNA in a cell free environment containing H<sub>2</sub>O<sub>2 </sub>is likely to be caused by metal-catalyzed reactions in the solvent, it is possible that the lack of oxidizing effect of the SRM1650 and SRM2975 is because the levels of transition metals are very low and/or not available to facilitate catalysis. E.g. the concentration of iron in the ASPM samples was 1800 times higher than for the SRMs (37 versus 0.02 &#956;g/mg, respectively), although the small variation between the filters was not reflected in the small variation in DNA oxidation. It has been shown that iron and iron-containing mineral fibres dose-dependently can generate 8-oxodG in naked DNA <abbrgrp><abbr bid="B29">29</abbr><abbr bid="B30">30</abbr></abbrgrp>. In addition, PM collected in an urban location in Washington DC by NIST (SRM1649) also generated 8-oxodG in isolated DNA <abbrgrp><abbr bid="B31">31</abbr></abbrgrp>; this preparation has higher concentration of transition metals than both SRM1650 and SRM2975 <abbrgrp><abbr bid="B22">22</abbr></abbrgrp>. Similarly, urban air PM induced 8-oxodG in DNA measured by immunochemical methods with some differences between different size fractions <abbrgrp><abbr bid="B26">26</abbr><abbr bid="B27">27</abbr></abbrgrp>. Authentic preparations of exhaust particles from light duty diesel engines without reported elemental composition could oxidize isolated DNA at very high doses from 5 mg to 20 mg of DEP without H<sub>2</sub>O<sub>2 </sub>or 10 mg/ml with H<sub>2</sub>O<sub>2 </sub><abbrgrp><abbr bid="B32">32</abbr><abbr bid="B33">33</abbr></abbrgrp>. Collectively, these investigations indicate that DEP, as compared to urban air PM, possess low direct oxidizing ability toward DNA in cell free environments unless at very high concentrations. In addition to transition metals, ASPMs might also contain larger quantities of semiquinone radicals that can generation of 8-oxodG in calf thymus DNA by direct oxidations of guanine bases <abbrgrp><abbr bid="B34">34</abbr></abbrgrp>.</p>
         <p>Contrary to the cell free system, the PM samples were able to induce SB and FPG sites in the DNA of A549 cells. The level of SB elicited by ASPM was similar to another recent and independent investigation of the PM collected on Jagtvej in 2005; that report indicated that exposure to 25 &#956;g/ml for 24 hours increased the DNA migration from 7% to 14% <abbrgrp><abbr bid="B25">25</abbr></abbrgrp>. This is the same as a net increase of 0.1 SB/10<sup>6 </sup>bp, using the conversion factor from The European Standards Committee on Oxidative DNA damage (assuming that 1% corresponds to 0.0185 SB/10<sup>6 </sup>bp). In our study, the net increase of SB at the same dose and exposure duration was 0.083, 0.12, and 0.12 SB/10<sup>6 </sup>bp for the SRM1650, SRM2975, and ASPM (all filters), respectively. Elevated levels of SB have been reported for a variety of authentic urban particles and SRMs in various cell types <abbrgrp><abbr bid="B35">35</abbr></abbrgrp>. E.g. exposure of A549 cells to street particles from Duisburg (Germany) and Stockholm (Sweden) increased the levels of SB at a dose of 20 &#956;g/cm<sup>2 </sup><abbrgrp><abbr bid="B27">27</abbr><abbr bid="B36">36</abbr></abbrgrp>, which is close to threshold of effect in our study (20 &#956;g/cm<sup>2 </sup>corresponds to 38 &#956;g/ml in our experimental setup). Our investigation extends the information of genotoxicity to encompass the oxidized guanines, including the pre-mutagenic 8-oxodG lesions. The net increase in FPG sites was somewhat higher in cell cultures exposed to 25 &#956;g/ml for 24 hours of SRM2975 (0.21 lesions/10<sup>6</sup>bp) than for the SRM1650 and ASPM samples (approximately 0.068 lesions/10<sup>6 </sup>bp; figure <figr fid="F5">5b</figr>). Importantly, the lowest effective dose generating oxidative damage to DNA was not associated with altered viability or reduced colony forming ability. This indicates that the genotoxicity is caused directly by the presence of the particles and it is not a secondary effect due to cytotoxicity and altered replication. The induction of oxidative damage to DNA by the SRM preparations is unlikely to be secondary to inflammatory responses elicited in the A549 cells. We have previously reported that cytokine responses required exposure to 500 &#956;g/ml of SRM1650 for 2 hours, whereas the level of SB was significantly increased after 2 hours with only 100 &#956;g/ml <abbrgrp><abbr bid="B17">17</abbr></abbrgrp>. This is also in line with findings of PM-induced DNA damage in a variety of cell types, including fibroblasts, hepatocytes and intestinal epithelium cell lines <abbrgrp><abbr bid="B35">35</abbr></abbrgrp>.</p>
         <p>The measurement of DEP-induced FPG sites has not been investigated before in lung epithelial cells exposed to authentic street particles, whereas two studies have reported elevated levels of 8-oxodG in lung epithelial cells exposed to urban PM, detected by immunohistochemistry and HPLC-EC, but only at one dose <abbrgrp><abbr bid="B26">26</abbr><abbr bid="B31">31</abbr></abbrgrp>. Investigations on oxidized guanines are probably more relevant for carcinogenesis than the types of DNA damage detected as SB by the comet assay. In addition, we have observed that exposure to air pollution elicits more pronounced effect in terms of FPG sites compared to SB in mononuclear blood cells of humans in Copenhagen and Cotonou, which is the heavily air polluted capital of the Republic of Benin <abbrgrp><abbr bid="B5">5</abbr><abbr bid="B6">6</abbr><abbr bid="B7">7</abbr></abbrgrp>. In this respect, the dose-dependent increase in FPG sites observed in this in vitro study provides firm evidence for the induction of oxidative damage to DNA by air pollution PM. It also outlines that the SRM1650 and SRM2975, which are samples of DEP, are reliable surrogate PM for authentic air pollution particles when measuring DNA damage in terms of SB an FPG sites in the comet assay.</p>
         <p>In conclusion, we show that ASPM and SRMs differ in their ability to form 8-oxodG in isolated DNA, whereas they induce SB and FPG sites in A549 cells in a dose-dependent manner. The SRM1650 preparation generated cytotoxicity at lower dose than the SRM2975 and ASPM samples, but it was not associated with differences in the genotoxic potency. In general, elevated cellular level of DNA damage was detected at doses with no overt cytotoxicity. We conclude that SRM1650 and SRM2975, which are well-characterized samples of DEP, are good model particles for ASPM, due to their equally DNA damaging effects in lung cells.</p>
      </sec>
      <sec>
         <st>
            <p>Methods</p>
         </st>
         <sec>
            <st>
               <p>Samples of authentic street PM and SRMs</p>
            </st>
            <p>Samples of SRM1650 and SRM2975 were obtained from the National Institute of Standards and Technology (Gaitersburg, MD, USA). The SRM1650 and SRM2975 are samples of diesel PM collected from the engine of heat exchangers and filtering system of an industrial diesel-powered forklift, respectively <abbrgrp><abbr bid="B20">20</abbr><abbr bid="B21">21</abbr></abbrgrp>. ASPM was collected on Millipore type RA membrane filters, consisting of a gridded membrane filter made from mixed esters of cellulose, as total suspended particulates at a monitoring station on Jagtvej in Copenhagen on five weekdays in September 2000. During this period the annual TSP concentration was &lt;50 &#956;g/m<sup>3 </sup>at Jagtvej. Based on measurements from the PM10 fraction was has been estimated that 11 &#956;g/m<sup>3 </sup>of PM<sub>10 </sub>concentration originated from traffic and the rest (22 &#956;g/m<sup>3</sup>) derive from road dust, tire wear, road salt and long-range transport of particles. Approximately 75% and 25% of the traffic-generated PM<sub>10 </sub>originated from diesel and petrol powered vehicles, respectively <abbrgrp><abbr bid="B37">37</abbr></abbrgrp>. The particles were collected and analyzed as a part of the Danish Air Quality Monitoring Programme (conducted by the Danish National Environmental Research Institute) and stored in dark containers at room temperature. The collection volume was 60 m<sup>3 </sup>and the total collected material was 56.5 &#177; 13.2 &#956;g/cm<sup>3 </sup>(mean &#177; SD, n = 5). The elemental composition (Al, Si, S, Cl, K, Ca, Ti, V, Cr, Mn, Fe, Ni, Cu, Zn, Ga, As, Se, Br, Rb, Sr, Zr, Mo, Sn, Sb, Ba and Pb) was measured by proton induced X-ray emission analysis at the National Environmental Research Institute, Denmark <abbrgrp><abbr bid="B38">38</abbr></abbrgrp>. Each filter was placed in a vial with 5 ml of ultrapure water and subjected to ultrasonication for 5 min at room temperature to liberate particles. Stock suspensions of these ASPM samples were stored at -20&#176;C until used in experiments. The concentration of the ASPM stock solutions (&#956;g/ml) was calculated from the total concentrations on the filters, assuming that all material was liberated from the filters. The size distribution was not defined. Stock suspensions with a concentration of 2500 &#956;g/ml of SRM1650 and SRM2975 were prepared in ultrapure water. The suspensions were ultrasonicated and vortexed prior to dilution with ultrapure water or cell medium to the final concentrations.</p>
         </sec>
         <sec>
            <st>
               <p>Cell culture</p>
            </st>
            <p>A549 cells (American Type Culture Collection, Manassas, VA, USA), kindly provided by the National Research Centre for the Working Environment, Denmark, were grown in F12 nutrient mixture (HAM) supplemented with 10% heat inactivated foetal bovine serum, 1% L-glutamine and 1% penicillin-streptomycin (incubation at 37&#176;C, 5% CO<sub>2</sub>). All were Gibco<sup>&#174; </sup>cell culture products purchased from Invitrogen&#8482;, Denmark.</p>
            <p>Plates of different sizes have been used in the experiments of LDH, colony forming ability, and comet assay. Exposures are reported as concentrations (&#956;g/ml). For comparison between the experiments in terms of cell area, the highest concentration (250 &#956;g/ml) in the 24 hour incubations corresponds to 132 &#956;g/cm<sup>2 </sup>(comet assay), 78 &#956;g/cm<sup>2 </sup>(colony forming assay), and 166 &#956;g/cm<sup>2 </sup>(LDH assay).</p>
         </sec>
         <sec>
            <st>
               <p>LDH assay</p>
            </st>
            <p>The cytotoxicity of SRMs and ASPM was measured as LDH activity in cell medium by the Cytotoxicity Detection Kit from Roche Applied Science, Penzberg, Germany. An increase in the number of dead or cell membrane-damaged cells increases the LDH activity in the cell culture supernatant. In this assay the well area was 0.3 cm<sup>2 </sup>(96 well culture plates) and the recommended amount of solution was 200 &#956;l in each well.</p>
         </sec>
         <sec>
            <st>
               <p>Colony forming assay</p>
            </st>
            <p>The ability of a single cell to form a colony of cells after exposure to SRMs and ASPM was determined by the colony forming assay as described previously <abbrgrp><abbr bid="B39">39</abbr></abbrgrp>. 3 &#215; 10<sup>5 </sup>cells were seeded into 6 well culture plates (9.6 cm<sup>2</sup>/well) in 3 ml cell culture medium. After 48 hours of incubation, cells were washed with phosphate buffer saline, and 3 ml SRM1650, SRM2975 or ASPM samples with concentrations corresponding to doses at 0, 2.5, 25, 100 and 250 &#956;g/ml was added. In this assay, suspensions of ASPM were pooled from different filters, because of limited amount of material. Hereafter 200 cells were seeded into 6 well culture plates with 3 ml medium and incubated for 5 days in 5% CO<sub>2 </sub>and 37&#176;C. The cells were treated in methanol for 10 minutes and stained with trypan blue for 30 minutes. The number of colonies with more than 50 cells was counted using a magnifying glass.</p>
         </sec>
         <sec>
            <st>
               <p>Measurement of DNA damage in A549 cells by the comet assay</p>
            </st>
            <p>DNA damage was measured as the formation of SB and FPG sites in the DNA by the comet assay as previously described <abbrgrp><abbr bid="B15">15</abbr><abbr bid="B40">40</abbr></abbrgrp>. For experiments, 10<sup>5 </sup>cells were seeded into 24 well culture plates (1.9 cm<sup>2</sup>/well), and grown for 48 hours (~80% confluence). The cells were treated with 1 ml SRM stock suspension diluted with cell culture medium to final concentrations; 0, 2.5, 25, 100 and 250 &#956;g/ml or with 1 ml ASPM solution diluted with cell culture medium to final concentrations; 0, 2.5, 25, and 100 &#956;g/ml. The cells were harvested after 3, 24 or 48 hours exposure with trypsin-EDTA (Invitrogen&#8482;, Denmark) and finally centrifuged at 3000 rpm for 6 minutes before addition of agarose gel.</p>
            <p>The cell culture experiments were carried out on three different days for both SRMs and ASPM. Cells were exposed to the SRMs and ASPM in triplicates/day (N<sub>total </sub>= 9) and duplicates/day (N<sub>total </sub>= 6), respectively.</p>
            <p>The samples were coded before visual scoring, where the level of SB and FPG sites was obtained by scoring 100 nuclei using a five-class scoring system (arbitrary score range: 0&#8211;400). The primary comet assay endpoints in arbitrary units were transformed into lesions/10<sup>6 </sup>base pair (bp), using an investigator-specific X-ray calibration curve and assuming that human diploid cells contain 4 &#215; 10<sup>12 </sup>Dalton DNA (corresponding to 6 &#215; 10<sup>9 </sup>bp) as reported previously <abbrgrp><abbr bid="B41">41</abbr></abbrgrp>.</p>
         </sec>
         <sec>
            <st>
               <p>Measurement of 8-oxodG in calf thymus DNA</p>
            </st>
            <p>Different concentrations of ASPM were added to solutions of calf thymus DNA (150 &#956;g/ml) in a total volume of 0.5 ml with 10 &#956;M of H<sub>2</sub>O<sub>2 </sub>and incubated for 30 min at 37&#176;C. For the determination of 8-oxodG generation by SRM1650 and SRM2975, SRM preparations were added to solutions of calf thymus DNA (300 &#956;g/ml) in a total volume of 1 ml with or without 5 mM of H<sub>2</sub>O<sub>2 </sub>and incubated for 30 or 120 minutes at 37&#176;C. The exposed DNA was precipitated, subjected to enzyme digestion and high performance liquid chromatography analysis with electrochemical detection (HPLC-EC) as described previously <abbrgrp><abbr bid="B42">42</abbr></abbrgrp>. The results are presented as the ratio between 8-oxodG and the normal dG.</p>
         </sec>
         <sec>
            <st>
               <p>Statistics</p>
            </st>
            <p>All variables were tested for normal distribution using the Shapiro-Wilks test. If groups did not show homogeneity of variance by Levene's test, they were either log-transformed or cubic root transformed before further statistical analysis. Data that did not show homogeneity variance were analysed by the non-parametric Kruskal-Wallis test, with post-hoc Tukey-type multiple comparison test or the Mann-Whitney U test. Data that had homogeneity of variance were tested with ANOVA with post-hoc Fisher test. The dose-response relationship in DNA damage detected by the comet assay of ASPM samples was tested by a randomized block ANOVA analysis; only the mean values for each treatment was included in the test (corresponding to N = 20). The data on comet assay endpoints displayed inter-experiment variation that made it difficult to compare different samples directly. Therefore, the raw data are baseline-adjusted; the mean of the zero dose culture was subtracted from each data point. All variables were tested at the 5% probability significance level. P-values refer to post-hoc tests. The statistical analysis was performed in Statistica 5.5 (StatSoft, Inc., Tulsa, USA).</p>
         </sec>
      </sec>
      <sec>
         <st>
            <p>List of abbreviations</p>
         </st>
         <p>8-oxo-7,8-dihydro-2'-deoxyguanosine; ASPM: Authentic street particulate matter; bp: Base pair; DEP: Diesel exhaust particles; FPG: Formamidopyrimidine glycosylase; HPLC-EC: High performance liquid chromatography with electrochemical detection; LDH: Lactate dehydrogenase; NIST: National Institute of Standards and Technology; PAH: Polycyclic aromatic hydrocarbons; PM: Particulate matter; SB: Strand breaks; SRM: Standard reference material.</p>
      </sec>
      <sec>
         <st>
            <p>Competing interests</p>
         </st>
         <p>The authors declare that they have no competing interests.</p>
      </sec>
      <sec>
         <st>
            <p>Authors' contributions</p>
         </st>
         <p>SL and PM conceived the study. PHD, SL and PM designed experiments. PHD made all experiments, except the data on 8-oxodG is calf thymus DNA that was analyzed by a laboratory technician under the supervision of SL and PM. The statistical analysis was carried out by PHD, who also provided the first draft of the manuscript. SL and PM have revised the draft critically and have approved of the final version to be published. All authors have read and approved the final manuscript.</p>
      </sec>
   </bdy>
   <bm>
      <ack>
         <sec>
            <st>
               <p>Acknowledgements</p>
            </st>
            <p>The authors are supported by the Danish Research Councils and partners of ECNIS (Environmental Cancer Risk, Nutrition and Individual Susceptibility), a network of excellence operating within the European Union 6th Framework Program, Priority 5: "Food Quality and Safety" (Contract No 513943). The technical assistance from Anna Hansen is gratefully acknowledged.</p>
            <p>The FPG enzyme was kindly provided by Professor Andrew Collins, University of Oslo, Norway.</p>
         </sec>
      </ack>
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